Publications
2024
AAV-mediated genome editing is influenced by the formation of R-loops – Francesco Puzzo, Magdalena P Crossley, Aranyak Goswami, Feijie Zhang, Katja Pekrun, Jada L Garzon, Karlene A Cimprich, Mark A Kay bioRxiv 10.1101/2024.05.07.592855
Correlation of antigen expression with epigenetic modifications after rAAV delivery of a human factor IX variant in mice and rhesus macaques – Katja Pekrun, Calvin J Stephens, Adriana Gonzalez-Sandoval, Aranyak Goswami, Feijie Zhang, Alice F Tarantal, Grant Blouse, Mark A Kay Molecular Therapy Volume 32 Issue 7 p2037-2426
2022
COVID-19 COMPLICATIONS AND SUGGESTED MEASURES: MODERN TOOLS FOR INTERVENING PANDEMIC – J. J Yusuf, K. Z., Ansar, W., Goswami, A., Mandal, S., Tahrim, H., Poddar, S., & Jawed Journal of Health and Translational Medicine, 25 (1), 145-153
2021
Drinking and smoking polygenic risk is associated with childhood and early-adulthood psychiatric and behavioral traits independently of substance use and psychiatric genetic risk – Flavio De Angelis, Frank R Wendt, Gita A Pathak, Daniel S Tylee, Aranyak Goswami, Joel Gelernter, Renato Polimanti Translational Psychiatry 11 (1), 586
ACE2 Netlas: In silico Functional Characterization and Drug-Gene Interactions of ACE2 Gene Network to Understand Its Potential Involvement in COVID-19 Susceptibility – Gita A Pathak, Frank R Wendt, Aranyak Goswami, Dora Koller, Flavio De Angelis, COVID-19 Host Genetics Initiative, Renato Polimanti Frontiers in genetics 12, 698033
Role of microbes in the pathogenesis of neuropsychiatric disorders – Aranyak Goswami, Frank R Wendt, Gita A Pathak, Daniel S Tylee, Flavio De Angelis, Antonella De Lillo, Renato Polimanti Frontiers in neuroendocrinology 62, 100917
Sex-stratified gene-by-environment genome-wide interaction study of trauma, posttraumatic-stress, and suicidality – Frank R Wendt, Gita A Pathak, Daniel F Levey, Yaira Z Nuñez, Cassie Overstreet, Chelsea Tyrrell, Keyrun Adhikari, Flavio De Angelis, Daniel S Tylee, Aranyak Goswami, John H Krystal, Chadi G Abdallah, Murray B Stein, Henry R Kranzler, Joel Gelernter, Renato Polimanti Neurobiology of stress 14, 100309
Epigenomic Profiles of African-American Transthyretin Val122Ile Carriers Reveals Putatively Dysregulated Amyloid Mechanisms – Gita A Pathak, Frank R Wendt, Antonella De Lillo, Yaira Z Nunez, Aranyak Goswami, Flavio De Angelis, Maria Fuciarelli, Henry R Kranzler, Joel Gelernter, Renato Polimanti Circulation: Genomic and Precision Medicine 14 (1), e003011
2020
Drinking and smoking polygenic risk is associated with neurodevelopmental outcomes of children and young adults independently of psychopathology and substance use – Flavio De Angelis, Frank R Wendt, Gita A Pathak, Daniel S Tylee, Aranyak Goswami, Joel Gelernter, Renato Polimanti medRxiv, 2020.10. 22.20217596
DNA Methylation Profiles of African American Val122Ile-Transthyretin Mutation Carriers Reveals Genes Involved in Amyloidosis Regulation – Gita Pathak, Frank Wendt, Antonella De Lillo, Yari Nunez, Aranyak Goswami, Flavio De Angelis, Maria Fuciarelli, Henry Kranzler, Joel Gelernter, Renato Polimanti Circulation Research 127 (Suppl_1), A357-A357
Trauma and posttraumatic stress interact with sex-specific risk loci for suicidality and converge on brain extracellular matrix biology and synaptic plasticity – Frank R Wendt, Gita A Pathak, Daniel F Levey, Yaira Z Nuñez, Cassie Overstreet, Chelsea Tyrrell, Keyrun Adhikari, Flavio De Angelis, Daniel S Tylee, Aranyak Goswami, John H Krystal, Chadi G Abdallah, Murray B Stein, Henry R Kranzler, Joel Gelernter, Renato Polimanti medRxiv, 2020.05. 18.20105734
Heterogeneity and polygenicity in psychiatric disorders: a genome-wide perspective – Frank R Wendt, Gita A Pathak, Daniel S Tylee, Aranyak Goswami, Renato Polimanti Chronic Stress 4, 2470547020924844
Heterogeneity and polygenicity in psychiatric disorders: A genome-wide perspective. – FR Wendt, GA Pathak, DS Tylee, A Goswami, R Polimanti Chronic Stress, 4, Article 2470547020924844
2017
Exploring the genome and proteome landscapes of the genus Bacillus in quest of lineage and niche specific traits through in silico analysis – Aranyak Goswami Kolkata
2015
Strand-biased gene distribution, purine assymetry and environmental factors influence protein evolution in Bacillus – Aranyak Goswami, Anindya Roy Chowdhury, Munmun Sarkar, Sanjoy Kumar Saha, Sandip Paul, Chitra Dutta FEBS letters 589 (5), 629-638
2014
Association of purine asymmetry, strand-biased gene distribution and PolC within Firmicutes and beyond: a new appraisal – Sanjoy Kumar Saha, Aranyak Goswami, Chitra Dutta BMC genomics 15, 1-26
Manuscript in preparation
- AAV-mediated genome editing is influenced by the presence and formation of genomic DNA/RNA hybrids
- Using recombinant adeno-associated viral vectors for expression of a hyperactive human Factor IX mutant in homophilic mice and non-human primates.
- Exploring the role of metabolism in establishing Genetic Compensation in zebrafish
Papers reviewed
As a journal reviewer, I’ve reviewed the following articles:
Title: “The Association Between Baseline Viral Load and Long-Term Risk in Patients with COVID-19 in Hong Kong: A Territory-Wide Study”
Journal: Scientific Reports
Title: “Risk of SARS-CoV-2 Infection and Hospitalization in Individuals with Natural, Vaccine-Induced, and Hybrid Immunity: A Retrospective Population-Based Cohort Study from Estonia”
Journal: Scientific Reports
Title: “Diabetes: Discovery of Insulin, Genetic, Epigenetic, and Viral Infection-Mediated Regulation”
Journal: Nucleus
In my capacity as a journal reviewer, I have evaluated these articles for their content, methodology, and scientific rigor to provide feedback and assessments for publication.